Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hdac1O09106 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Hdac1O09106 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Hdac1O09106 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Hdac1O09106 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Hdac1O09106 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hdac1O09106 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.43■■■□□ 2.46
Hdac1O09106 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Hdac1O09106 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Hdac1O09106 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Hdac1O09106 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Hdac1O09106 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Hdac1O09106 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Hdac1O09106 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Hdac1O09106 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.39■■■□□ 2.46
Hdac1O09106 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Hdac1O09106 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.38■■■□□ 2.45
Hdac1O09106 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Hdac1O09106 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Hdac1O09106 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Hdac1O09106 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.35■■■□□ 2.45
Hdac1O09106 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.34■■■□□ 2.45
Hdac1O09106 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Hdac1O09106 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
Hdac1O09106 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Hdac1O09106 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.31■■■□□ 2.44
Hdac1O09106 Gm27322-201ENSMUST00000184007 104 ntBASIC30.31■■■□□ 2.44
Hdac1O09106 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Hdac1O09106 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
Hdac1O09106 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Hdac1O09106 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hdac1O09106 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
Hdac1O09106 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Hdac1O09106 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.27■■■□□ 2.44
Hdac1O09106 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hdac1O09106 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Hdac1O09106 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Hdac1O09106 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Hdac1O09106 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.24■■■□□ 2.43
Hdac1O09106 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.22■■■□□ 2.43
Hdac1O09106 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.22■■■□□ 2.43
Hdac1O09106 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Hdac1O09106 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Hdac1O09106 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Hdac1O09106 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Hdac1O09106 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Hdac1O09106 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.18■■■□□ 2.42
Hdac1O09106 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Hdac1O09106 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Hdac1O09106 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.16■■■□□ 2.42
Hdac1O09106 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Hdac1O09106 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Hdac1O09106 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.15■■■□□ 2.42
Hdac1O09106 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Hdac1O09106 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Hdac1O09106 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Hdac1O09106 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Hdac1O09106 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hdac1O09106 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.12■■■□□ 2.41
Hdac1O09106 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Hdac1O09106 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Hdac1O09106 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Hdac1O09106 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Hdac1O09106 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Hdac1O09106 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Hdac1O09106 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Hdac1O09106 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Hdac1O09106 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Hdac1O09106 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Hdac1O09106 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Hdac1O09106 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hdac1O09106 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hdac1O09106 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hdac1O09106 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Hdac1O09106 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hdac1O09106 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hdac1O09106 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.98■■■□□ 2.39
Hdac1O09106 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hdac1O09106 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hdac1O09106 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Hdac1O09106 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Hdac1O09106 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hdac1O09106 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Hdac1O09106 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Hdac1O09106 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Hdac1O09106 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.92■■■□□ 2.38
Hdac1O09106 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hdac1O09106 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.9■■■□□ 2.38
Hdac1O09106 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Hdac1O09106 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.89■■■□□ 2.38
Hdac1O09106 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Hdac1O09106 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Hdac1O09106 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Hdac1O09106 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Hdac1O09106 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Hdac1O09106 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Hdac1O09106 Peli2-204ENSMUST00000226513 1320 ntBASIC29.86■■■□□ 2.37
Hdac1O09106 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Hdac1O09106 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Hdac1O09106 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms