Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hps1O08983 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hps1O08983 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hps1O08983 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Hps1O08983 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Hps1O08983 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hps1O08983 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Hps1O08983 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hps1O08983 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hps1O08983 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hps1O08983 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hps1O08983 Gm16148-201ENSMUST00000119653 893 ntBASIC22.81■■□□□ 1.24
Hps1O08983 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hps1O08983 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hps1O08983 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hps1O08983 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hps1O08983 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.78■■□□□ 1.24
Hps1O08983 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.77■■□□□ 1.24
Hps1O08983 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.75■■□□□ 1.23
Hps1O08983 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Hps1O08983 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hps1O08983 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hps1O08983 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Hps1O08983 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.71■■□□□ 1.23
Hps1O08983 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hps1O08983 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hps1O08983 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Hps1O08983 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.67■■□□□ 1.22
Hps1O08983 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hps1O08983 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Hps1O08983 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hps1O08983 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Hps1O08983 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hps1O08983 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Hps1O08983 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Hps1O08983 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hps1O08983 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Hps1O08983 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Hps1O08983 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hps1O08983 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.61■■□□□ 1.21
Hps1O08983 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Hps1O08983 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hps1O08983 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Hps1O08983 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Hps1O08983 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hps1O08983 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Hps1O08983 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.56■■□□□ 1.2
Hps1O08983 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hps1O08983 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hps1O08983 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hps1O08983 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hps1O08983 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
Hps1O08983 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hps1O08983 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.52■■□□□ 1.2
Hps1O08983 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Hps1O08983 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hps1O08983 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hps1O08983 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hps1O08983 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hps1O08983 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Hps1O08983 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hps1O08983 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hps1O08983 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hps1O08983 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.48■■□□□ 1.19
Hps1O08983 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hps1O08983 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.48■■□□□ 1.19
Hps1O08983 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hps1O08983 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Hps1O08983 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Hps1O08983 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hps1O08983 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hps1O08983 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hps1O08983 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.44■■□□□ 1.18
Hps1O08983 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hps1O08983 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hps1O08983 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hps1O08983 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hps1O08983 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hps1O08983 Gm45855-201ENSMUST00000212546 880 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms