Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hps1O08983 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hps1O08983 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Hps1O08983 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Hps1O08983 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Hps1O08983 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hps1O08983 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Hps1O08983 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hps1O08983 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hps1O08983 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hps1O08983 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hps1O08983 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hps1O08983 Gm16148-201ENSMUST00000119653 893 ntBASIC22.81■■□□□ 1.24
Hps1O08983 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hps1O08983 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hps1O08983 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hps1O08983 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hps1O08983 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.78■■□□□ 1.24
Hps1O08983 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.77■■□□□ 1.24
Hps1O08983 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hps1O08983 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.75■■□□□ 1.23
Hps1O08983 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Hps1O08983 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hps1O08983 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Hps1O08983 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Hps1O08983 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Hps1O08983 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.71■■□□□ 1.23
Hps1O08983 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Hps1O08983 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hps1O08983 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Hps1O08983 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Hps1O08983 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.67■■□□□ 1.22
Hps1O08983 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Hps1O08983 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Hps1O08983 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Hps1O08983 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Hps1O08983 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hps1O08983 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Hps1O08983 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Hps1O08983 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hps1O08983 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Hps1O08983 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Hps1O08983 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hps1O08983 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.61■■□□□ 1.21
Hps1O08983 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Hps1O08983 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hps1O08983 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Hps1O08983 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Hps1O08983 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hps1O08983 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Hps1O08983 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.56■■□□□ 1.2
Hps1O08983 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hps1O08983 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hps1O08983 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hps1O08983 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hps1O08983 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
Hps1O08983 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hps1O08983 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.52■■□□□ 1.2
Hps1O08983 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Hps1O08983 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Hps1O08983 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Hps1O08983 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Hps1O08983 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hps1O08983 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Hps1O08983 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Hps1O08983 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hps1O08983 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hps1O08983 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.48■■□□□ 1.19
Hps1O08983 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Hps1O08983 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.48■■□□□ 1.19
Hps1O08983 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Hps1O08983 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Hps1O08983 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Hps1O08983 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Hps1O08983 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hps1O08983 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hps1O08983 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Hps1O08983 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.44■■□□□ 1.18
Hps1O08983 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hps1O08983 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Hps1O08983 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hps1O08983 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Hps1O08983 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Hps1O08983 Gm45855-201ENSMUST00000212546 880 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms