Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Gm3139J3QK78 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Gm3139J3QK78 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Gm3139J3QK78 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Gm3139J3QK78 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Gm3139J3QK78 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Gm3139J3QK78 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm3139J3QK78 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Gm3139J3QK78 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Gm3139J3QK78 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Gm3139J3QK78 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Gm3139J3QK78 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Gm3139J3QK78 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Gm3139J3QK78 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm3139J3QK78 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Gm3139J3QK78 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Gm3139J3QK78 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Gm3139J3QK78 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Gm3139J3QK78 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Gm3139J3QK78 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Gm3139J3QK78 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm3139J3QK78 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Gm3139J3QK78 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Gm3139J3QK78 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.45■■□□□ 1.66
Gm3139J3QK78 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gm3139J3QK78 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gm3139J3QK78 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Gm3139J3QK78 Gm45855-201ENSMUST00000212546 880 ntBASIC25.43■■□□□ 1.66
Gm3139J3QK78 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Gm3139J3QK78 Gm9397-201ENSMUST00000200125 605 ntBASIC25.42■■□□□ 1.66
Gm3139J3QK78 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Gm3139J3QK78 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.41■■□□□ 1.66
Gm3139J3QK78 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm3139J3QK78 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.4■■□□□ 1.66
Gm3139J3QK78 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
Gm3139J3QK78 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Gm3139J3QK78 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.37■■□□□ 1.65
Gm3139J3QK78 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Gm3139J3QK78 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Gm3139J3QK78 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Gm3139J3QK78 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Gm3139J3QK78 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.32■■□□□ 1.64
Gm3139J3QK78 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
Gm3139J3QK78 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm3139J3QK78 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm3139J3QK78 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm3139J3QK78 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Gm3139J3QK78 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Gm3139J3QK78 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Gm3139J3QK78 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.29■■□□□ 1.64
Gm3139J3QK78 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Gm3139J3QK78 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.27■■□□□ 1.64
Gm3139J3QK78 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
Gm3139J3QK78 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm3139J3QK78 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm3139J3QK78 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Gm3139J3QK78 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3139J3QK78 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3139J3QK78 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3139J3QK78 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.24■■□□□ 1.63
Gm3139J3QK78 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3139J3QK78 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3139J3QK78 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.23■■□□□ 1.63
Gm3139J3QK78 Gm24970-201ENSMUST00000175582 82 ntBASIC25.23■■□□□ 1.63
Gm3139J3QK78 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.23■■□□□ 1.63
Gm3139J3QK78 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Gm3139J3QK78 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3139J3QK78 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3139J3QK78 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Gm3139J3QK78 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3139J3QK78 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Gm3139J3QK78 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Gm3139J3QK78 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Gm3139J3QK78 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Gm3139J3QK78 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Gm3139J3QK78 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Gm3139J3QK78 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Gm3139J3QK78 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
Gm3139J3QK78 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Gm3139J3QK78 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.16■■□□□ 1.62
Gm3139J3QK78 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.16■■□□□ 1.62
Gm3139J3QK78 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Gm3139J3QK78 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Gm3139J3QK78 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.14■■□□□ 1.62
Gm3139J3QK78 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.13■■□□□ 1.61
Gm3139J3QK78 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.12■■□□□ 1.61
Gm3139J3QK78 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gm3139J3QK78 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Gm3139J3QK78 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Gm3139J3QK78 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Gm3139J3QK78 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.09■■□□□ 1.61
Gm3139J3QK78 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Gm3139J3QK78 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Gm3139J3QK78 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Gm3139J3QK78 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Gm3139J3QK78 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Gm3139J3QK78 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm3139J3QK78 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm3139J3QK78 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Gm3139J3QK78 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms