Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Atf6F6VAN0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atf6F6VAN0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Atf6F6VAN0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Atf6F6VAN0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Atf6F6VAN0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Atf6F6VAN0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf6F6VAN0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf6F6VAN0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atf6F6VAN0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Atf6F6VAN0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atf6F6VAN0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atf6F6VAN0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Atf6F6VAN0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Atf6F6VAN0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Atf6F6VAN0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Atf6F6VAN0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Atf6F6VAN0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Atf6F6VAN0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Atf6F6VAN0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Atf6F6VAN0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.92■■□□□ 1.74
Atf6F6VAN0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Atf6F6VAN0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Atf6F6VAN0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Atf6F6VAN0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Atf6F6VAN0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Atf6F6VAN0 Zxda-201ENSMUST00000117281 2621 ntBASIC25.9■■□□□ 1.74
Atf6F6VAN0 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.9■■□□□ 1.74
Atf6F6VAN0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Atf6F6VAN0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Atf6F6VAN0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.87■■□□□ 1.73
Atf6F6VAN0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.87■■□□□ 1.73
Atf6F6VAN0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Atf6F6VAN0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Atf6F6VAN0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Atf6F6VAN0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Atf6F6VAN0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Atf6F6VAN0 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.83■■□□□ 1.73
Atf6F6VAN0 Gm16148-201ENSMUST00000119653 893 ntBASIC25.83■■□□□ 1.73
Atf6F6VAN0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Atf6F6VAN0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Atf6F6VAN0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Atf6F6VAN0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Atf6F6VAN0 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.82■■□□□ 1.72
Atf6F6VAN0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Atf6F6VAN0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Atf6F6VAN0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Atf6F6VAN0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
Atf6F6VAN0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Atf6F6VAN0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Atf6F6VAN0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Atf6F6VAN0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Atf6F6VAN0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Atf6F6VAN0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.78■■□□□ 1.72
Atf6F6VAN0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Atf6F6VAN0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Atf6F6VAN0 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.77■■□□□ 1.72
Atf6F6VAN0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Atf6F6VAN0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Atf6F6VAN0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.76■■□□□ 1.71
Atf6F6VAN0 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.74■■□□□ 1.71
Atf6F6VAN0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Atf6F6VAN0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Atf6F6VAN0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Atf6F6VAN0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Atf6F6VAN0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Atf6F6VAN0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Atf6F6VAN0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Atf6F6VAN0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.63■■□□□ 1.69
Atf6F6VAN0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Atf6F6VAN0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Atf6F6VAN0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Atf6F6VAN0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Atf6F6VAN0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Atf6F6VAN0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
Atf6F6VAN0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Atf6F6VAN0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Atf6F6VAN0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Atf6F6VAN0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Atf6F6VAN0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Atf6F6VAN0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Atf6F6VAN0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.56■■□□□ 1.68
Atf6F6VAN0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
Atf6F6VAN0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Atf6F6VAN0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Atf6F6VAN0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atf6F6VAN0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Atf6F6VAN0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Atf6F6VAN0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atf6F6VAN0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Atf6F6VAN0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Atf6F6VAN0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Atf6F6VAN0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.51■■□□□ 1.67
Atf6F6VAN0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Atf6F6VAN0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Atf6F6VAN0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Atf6F6VAN0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Atf6F6VAN0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Atf6F6VAN0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atf6F6VAN0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms