Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.87■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.8■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Mipep-204ENSMUST00000225043 1548 ntBASIC20.78■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.65■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Amer2-203ENSMUST00000225247 2662 ntBASIC20.6■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.58■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.51■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.5■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.44■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.43■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Zfp131-205ENSMUST00000223812 663 ntBASIC20.42■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms