Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc194A0A140LIT1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Ccdc194A0A140LIT1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ccdc194A0A140LIT1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ccdc194A0A140LIT1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Ccdc194A0A140LIT1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.03■■□□□ 1.6
Ccdc194A0A140LIT1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
Ccdc194A0A140LIT1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ccdc194A0A140LIT1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Ccdc194A0A140LIT1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Ccdc194A0A140LIT1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ccdc194A0A140LIT1 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.98■■□□□ 1.59
Ccdc194A0A140LIT1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ccdc194A0A140LIT1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.98■■□□□ 1.59
Ccdc194A0A140LIT1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Ccdc194A0A140LIT1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ccdc194A0A140LIT1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ccdc194A0A140LIT1 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.94■■□□□ 1.58
Ccdc194A0A140LIT1 Peli2-204ENSMUST00000226513 1320 ntBASIC24.94■■□□□ 1.58
Ccdc194A0A140LIT1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ccdc194A0A140LIT1 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.92■■□□□ 1.58
Ccdc194A0A140LIT1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Ccdc194A0A140LIT1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ccdc194A0A140LIT1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ccdc194A0A140LIT1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ccdc194A0A140LIT1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc194A0A140LIT1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Ccdc194A0A140LIT1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc194A0A140LIT1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
Ccdc194A0A140LIT1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ccdc194A0A140LIT1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Ccdc194A0A140LIT1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc194A0A140LIT1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc194A0A140LIT1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc194A0A140LIT1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Ccdc194A0A140LIT1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc194A0A140LIT1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc194A0A140LIT1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.85■■□□□ 1.57
Ccdc194A0A140LIT1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Ccdc194A0A140LIT1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc194A0A140LIT1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc194A0A140LIT1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc194A0A140LIT1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc194A0A140LIT1 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.81■■□□□ 1.56
Ccdc194A0A140LIT1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc194A0A140LIT1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc194A0A140LIT1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc194A0A140LIT1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc194A0A140LIT1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ccdc194A0A140LIT1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ccdc194A0A140LIT1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ccdc194A0A140LIT1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ccdc194A0A140LIT1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.77■■□□□ 1.56
Ccdc194A0A140LIT1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ccdc194A0A140LIT1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ccdc194A0A140LIT1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.74■■□□□ 1.55
Ccdc194A0A140LIT1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Ccdc194A0A140LIT1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ccdc194A0A140LIT1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ccdc194A0A140LIT1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ccdc194A0A140LIT1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ccdc194A0A140LIT1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ccdc194A0A140LIT1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ccdc194A0A140LIT1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Ccdc194A0A140LIT1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ccdc194A0A140LIT1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc194A0A140LIT1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc194A0A140LIT1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc194A0A140LIT1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc194A0A140LIT1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc194A0A140LIT1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc194A0A140LIT1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc194A0A140LIT1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc194A0A140LIT1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc194A0A140LIT1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc194A0A140LIT1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc194A0A140LIT1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc194A0A140LIT1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc194A0A140LIT1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc194A0A140LIT1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc194A0A140LIT1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
Ccdc194A0A140LIT1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Ccdc194A0A140LIT1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc194A0A140LIT1 Gm24804-201ENSMUST00000174982 85 ntBASIC24.63■■□□□ 1.53
Ccdc194A0A140LIT1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
Ccdc194A0A140LIT1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc194A0A140LIT1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc194A0A140LIT1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.59■■□□□ 1.53
Ccdc194A0A140LIT1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.58■■□□□ 1.53
Ccdc194A0A140LIT1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.58■■□□□ 1.53
Ccdc194A0A140LIT1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Ccdc194A0A140LIT1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.57■■□□□ 1.52
Ccdc194A0A140LIT1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc194A0A140LIT1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc194A0A140LIT1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.57■■□□□ 1.52
Ccdc194A0A140LIT1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc194A0A140LIT1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Ccdc194A0A140LIT1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Ccdc194A0A140LIT1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc194A0A140LIT1 Amer2-203ENSMUST00000225247 2662 ntBASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms