Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC56.5■■■■■ 6.64
Gm35339A0A140LHH9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC56.49■■■■■ 6.63
Gm35339A0A140LHH9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC56.48■■■■■ 6.63
Gm35339A0A140LHH9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC56.48■■■■■ 6.63
Gm35339A0A140LHH9 Gm43863-201ENSMUST00000203822 1192 ntBASIC56.47■■■■■ 6.63
Gm35339A0A140LHH9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC56.46■■■■■ 6.63
Gm35339A0A140LHH9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC56.46■■■■■ 6.63
Gm35339A0A140LHH9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC56.43■■■■■ 6.62
Gm35339A0A140LHH9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC56.41■■■■■ 6.62
Gm35339A0A140LHH9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC56.41■■■■■ 6.62
Gm35339A0A140LHH9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC56.34■■■■■ 6.61
Gm35339A0A140LHH9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC56.3■■■■■ 6.6
Gm35339A0A140LHH9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC56.29■■■■■ 6.6
Gm35339A0A140LHH9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC56.29■■■■■ 6.6
Gm35339A0A140LHH9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC56.29■■■■■ 6.6
Gm35339A0A140LHH9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC56.25■■■■■ 6.6
Gm35339A0A140LHH9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC56.24■■■■■ 6.59
Gm35339A0A140LHH9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC56.24■■■■■ 6.59
Gm35339A0A140LHH9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC56.23■■■■■ 6.59
Gm35339A0A140LHH9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC56.23■■■■■ 6.59
Gm35339A0A140LHH9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC56.22■■■■■ 6.59
Gm35339A0A140LHH9 AC157572.2-201ENSMUST00000226970 908 ntBASIC56.21■■■■■ 6.59
Gm35339A0A140LHH9 Gm42809-201ENSMUST00000198429 1138 ntBASIC56.2■■■■■ 6.59
Gm35339A0A140LHH9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC56.2■■■■■ 6.59
Gm35339A0A140LHH9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC56.17■■■■■ 6.58
Gm35339A0A140LHH9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC56.07■■■■■ 6.57
Gm35339A0A140LHH9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC56.06■■■■■ 6.56
Gm35339A0A140LHH9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC56.03■■■■■ 6.56
Gm35339A0A140LHH9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC55.98■■■■■ 6.55
Gm35339A0A140LHH9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC55.97■■■■■ 6.55
Gm35339A0A140LHH9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC55.95■■■■■ 6.55
Gm35339A0A140LHH9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC55.94■■■■■ 6.55
Gm35339A0A140LHH9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC55.92■■■■■ 6.54
Gm35339A0A140LHH9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC55.91■■■■■ 6.54
Gm35339A0A140LHH9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC55.89■■■■■ 6.54
Gm35339A0A140LHH9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC55.88■■■■■ 6.54
Gm35339A0A140LHH9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC55.87■■■■■ 6.53
Gm35339A0A140LHH9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC55.84■■■■■ 6.53
Gm35339A0A140LHH9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC55.84■■■■■ 6.53
Gm35339A0A140LHH9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC55.8■■■■■ 6.52
Gm35339A0A140LHH9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC55.76■■■■■ 6.52
Gm35339A0A140LHH9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC55.75■■■■■ 6.52
Gm35339A0A140LHH9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC55.74■■■■■ 6.51
Gm35339A0A140LHH9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC55.71■■■■■ 6.51
Gm35339A0A140LHH9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC55.7■■■■■ 6.51
Gm35339A0A140LHH9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC55.69■■■■■ 6.51
Gm35339A0A140LHH9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC55.66■■■■■ 6.5
Gm35339A0A140LHH9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC55.66■■■■■ 6.5
Gm35339A0A140LHH9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC55.63■■■■■ 6.5
Gm35339A0A140LHH9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC55.59■■■■■ 6.49
Gm35339A0A140LHH9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC55.56■■■■■ 6.48
Gm35339A0A140LHH9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC55.55■■■■■ 6.48
Gm35339A0A140LHH9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC55.55■■■■■ 6.48
Gm35339A0A140LHH9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC55.54■■■■■ 6.48
Gm35339A0A140LHH9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC55.51■■■■■ 6.48
Gm35339A0A140LHH9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC55.51■■■■■ 6.48
Gm35339A0A140LHH9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC55.5■■■■■ 6.48
Gm35339A0A140LHH9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC55.5■■■■■ 6.47
Gm35339A0A140LHH9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC55.48■■■■■ 6.47
Gm35339A0A140LHH9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC55.48■■■■■ 6.47
Gm35339A0A140LHH9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC55.47■■■■■ 6.47
Gm35339A0A140LHH9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC55.47■■■■■ 6.47
Gm35339A0A140LHH9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC55.45■■■■■ 6.47
Gm35339A0A140LHH9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC55.44■■■■■ 6.47
Gm35339A0A140LHH9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC55.42■■■■■ 6.46
Gm35339A0A140LHH9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC55.42■■■■■ 6.46
Gm35339A0A140LHH9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC55.42■■■■■ 6.46
Gm35339A0A140LHH9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC55.41■■■■■ 6.46
Gm35339A0A140LHH9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC55.4■■■■■ 6.46
Gm35339A0A140LHH9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC55.38■■■■■ 6.46
Gm35339A0A140LHH9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC55.38■■■■■ 6.46
Gm35339A0A140LHH9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC55.37■■■■■ 6.45
Gm35339A0A140LHH9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC55.34■■■■■ 6.45
Gm35339A0A140LHH9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC55.32■■■■■ 6.45
Gm35339A0A140LHH9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC55.32■■■■■ 6.45
Gm35339A0A140LHH9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC55.31■■■■■ 6.44
Gm35339A0A140LHH9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC55.29■■■■■ 6.44
Gm35339A0A140LHH9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC55.28■■■■■ 6.44
Gm35339A0A140LHH9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC55.27■■■■■ 6.44
Gm35339A0A140LHH9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC55.27■■■■■ 6.44
Gm35339A0A140LHH9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC55.24■■■■■ 6.43
Gm35339A0A140LHH9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC55.24■■■■■ 6.43
Gm35339A0A140LHH9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC55.24■■■■■ 6.43
Gm35339A0A140LHH9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC55.23■■■■■ 6.43
Gm35339A0A140LHH9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC55.22■■■■■ 6.43
Gm35339A0A140LHH9 Nkain2-201ENSMUST00000092602 558 ntBASIC55.22■■■■■ 6.43
Gm35339A0A140LHH9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC55.21■■■■■ 6.43
Gm35339A0A140LHH9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC55.21■■■■■ 6.43
Gm35339A0A140LHH9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC55.2■■■■■ 6.43
Gm35339A0A140LHH9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC55.18■■■■■ 6.42
Gm35339A0A140LHH9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC55.18■■■■■ 6.42
Gm35339A0A140LHH9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC55.18■■■■■ 6.42
Gm35339A0A140LHH9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC55.17■■■■■ 6.42
Gm35339A0A140LHH9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC55.16■■■■■ 6.42
Gm35339A0A140LHH9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC55.15■■■■■ 6.42
Gm35339A0A140LHH9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC55.14■■■■■ 6.42
Gm35339A0A140LHH9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC55.14■■■■■ 6.42
Gm35339A0A140LHH9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC55.13■■■■■ 6.42
Gm35339A0A140LHH9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC55.11■■■■■ 6.41
Gm35339A0A140LHH9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC55.1■■■■■ 6.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms