Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm27322-201ENSMUST00000184007 104 ntBASIC20.97■□□□□ 0.95
Trbv29A0A0G2LB96 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trbv29A0A0G2LB96 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv29A0A0G2LB96 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv29A0A0G2LB96 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trbv29A0A0G2LB96 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Trbv29A0A0G2LB96 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trbv29A0A0G2LB96 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trbv29A0A0G2LB96 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Trbv29A0A0G2LB96 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbv29A0A0G2LB96 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbv29A0A0G2LB96 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.93■□□□□ 0.94
Trbv29A0A0G2LB96 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv29A0A0G2LB96 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv29A0A0G2LB96 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv29A0A0G2LB96 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trbv29A0A0G2LB96 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.91■□□□□ 0.94
Trbv29A0A0G2LB96 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv29A0A0G2LB96 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv29A0A0G2LB96 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Trbv29A0A0G2LB96 Amer2-203ENSMUST00000225247 2662 ntBASIC20.9■□□□□ 0.94
Trbv29A0A0G2LB96 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Trbv29A0A0G2LB96 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv29A0A0G2LB96 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Trbv29A0A0G2LB96 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trbv29A0A0G2LB96 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv29A0A0G2LB96 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv29A0A0G2LB96 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trbv29A0A0G2LB96 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trbv29A0A0G2LB96 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbv29A0A0G2LB96 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trbv29A0A0G2LB96 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv29A0A0G2LB96 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.85■□□□□ 0.93
Trbv29A0A0G2LB96 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trbv29A0A0G2LB96 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trbv29A0A0G2LB96 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv29A0A0G2LB96 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv29A0A0G2LB96 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv29A0A0G2LB96 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trbv29A0A0G2LB96 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv29A0A0G2LB96 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv29A0A0G2LB96 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv29A0A0G2LB96 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv29A0A0G2LB96 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv29A0A0G2LB96 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.8■□□□□ 0.92
Trbv29A0A0G2LB96 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.79■□□□□ 0.92
Trbv29A0A0G2LB96 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv29A0A0G2LB96 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv29A0A0G2LB96 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv29A0A0G2LB96 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.78■□□□□ 0.92
Trbv29A0A0G2LB96 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trbv29A0A0G2LB96 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv29A0A0G2LB96 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv29A0A0G2LB96 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv29A0A0G2LB96 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv29A0A0G2LB96 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv29A0A0G2LB96 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv29A0A0G2LB96 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.74■□□□□ 0.91
Trbv29A0A0G2LB96 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Trbv29A0A0G2LB96 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv29A0A0G2LB96 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.73■□□□□ 0.91
Trbv29A0A0G2LB96 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trbv29A0A0G2LB96 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv29A0A0G2LB96 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv29A0A0G2LB96 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.71■□□□□ 0.91
Trbv29A0A0G2LB96 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv29A0A0G2LB96 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv29A0A0G2LB96 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv29A0A0G2LB96 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.7■□□□□ 0.9
Trbv29A0A0G2LB96 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.69■□□□□ 0.9
Trbv29A0A0G2LB96 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv29A0A0G2LB96 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv29A0A0G2LB96 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv29A0A0G2LB96 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.68■□□□□ 0.9
Trbv29A0A0G2LB96 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.68■□□□□ 0.9
Trbv29A0A0G2LB96 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv29A0A0G2LB96 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv29A0A0G2LB96 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trbv29A0A0G2LB96 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbv29A0A0G2LB96 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv29A0A0G2LB96 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trbv29A0A0G2LB96 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv29A0A0G2LB96 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv29A0A0G2LB96 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv29A0A0G2LB96 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv29A0A0G2LB96 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv29A0A0G2LB96 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trbv29A0A0G2LB96 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv29A0A0G2LB96 Peli2-204ENSMUST00000226513 1320 ntBASIC20.59■□□□□ 0.89
Trbv29A0A0G2LB96 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trbv29A0A0G2LB96 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv29A0A0G2LB96 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv29A0A0G2LB96 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbv29A0A0G2LB96 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbv29A0A0G2LB96 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv29A0A0G2LB96 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv29A0A0G2LB96 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv29A0A0G2LB96 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv29A0A0G2LB96 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv29A0A0G2LB96 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms