Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tmem116A0A0G2JGD3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmem116A0A0G2JGD3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tmem116A0A0G2JGD3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tmem116A0A0G2JGD3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tmem116A0A0G2JGD3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmem116A0A0G2JGD3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmem116A0A0G2JGD3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmem116A0A0G2JGD3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tmem116A0A0G2JGD3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Tmem116A0A0G2JGD3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tmem116A0A0G2JGD3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmem116A0A0G2JGD3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmem116A0A0G2JGD3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tmem116A0A0G2JGD3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tmem116A0A0G2JGD3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tmem116A0A0G2JGD3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tmem116A0A0G2JGD3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tmem116A0A0G2JGD3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmem116A0A0G2JGD3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tmem116A0A0G2JGD3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tmem116A0A0G2JGD3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tmem116A0A0G2JGD3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tmem116A0A0G2JGD3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.07■□□□□ 0.96
Tmem116A0A0G2JGD3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tmem116A0A0G2JGD3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tmem116A0A0G2JGD3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tmem116A0A0G2JGD3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tmem116A0A0G2JGD3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tmem116A0A0G2JGD3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem116A0A0G2JGD3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem116A0A0G2JGD3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem116A0A0G2JGD3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tmem116A0A0G2JGD3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tmem116A0A0G2JGD3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tmem116A0A0G2JGD3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tmem116A0A0G2JGD3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tmem116A0A0G2JGD3 Gm45855-201ENSMUST00000212546 880 ntBASIC21■□□□□ 0.95
Tmem116A0A0G2JGD3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21■□□□□ 0.95
Tmem116A0A0G2JGD3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.99■□□□□ 0.95
Tmem116A0A0G2JGD3 Gm9397-201ENSMUST00000200125 605 ntBASIC20.99■□□□□ 0.95
Tmem116A0A0G2JGD3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Tmem116A0A0G2JGD3 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.99■□□□□ 0.95
Tmem116A0A0G2JGD3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tmem116A0A0G2JGD3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem116A0A0G2JGD3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem116A0A0G2JGD3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Tmem116A0A0G2JGD3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tmem116A0A0G2JGD3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem116A0A0G2JGD3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem116A0A0G2JGD3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tmem116A0A0G2JGD3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Tmem116A0A0G2JGD3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmem116A0A0G2JGD3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tmem116A0A0G2JGD3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmem116A0A0G2JGD3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmem116A0A0G2JGD3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem116A0A0G2JGD3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem116A0A0G2JGD3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Tmem116A0A0G2JGD3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem116A0A0G2JGD3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmem116A0A0G2JGD3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmem116A0A0G2JGD3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.88■□□□□ 0.93
Tmem116A0A0G2JGD3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem116A0A0G2JGD3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem116A0A0G2JGD3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem116A0A0G2JGD3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem116A0A0G2JGD3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tmem116A0A0G2JGD3 Gm24970-201ENSMUST00000175582 82 ntBASIC20.87■□□□□ 0.93
Tmem116A0A0G2JGD3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.86■□□□□ 0.93
Tmem116A0A0G2JGD3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.86■□□□□ 0.93
Tmem116A0A0G2JGD3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tmem116A0A0G2JGD3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tmem116A0A0G2JGD3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tmem116A0A0G2JGD3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tmem116A0A0G2JGD3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tmem116A0A0G2JGD3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tmem116A0A0G2JGD3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tmem116A0A0G2JGD3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.83■□□□□ 0.93
Tmem116A0A0G2JGD3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.82■□□□□ 0.92
Tmem116A0A0G2JGD3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.82■□□□□ 0.92
Tmem116A0A0G2JGD3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tmem116A0A0G2JGD3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tmem116A0A0G2JGD3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tmem116A0A0G2JGD3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.8■□□□□ 0.92
Tmem116A0A0G2JGD3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
Tmem116A0A0G2JGD3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.79■□□□□ 0.92
Tmem116A0A0G2JGD3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem116A0A0G2JGD3 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.78■□□□□ 0.92
Tmem116A0A0G2JGD3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem116A0A0G2JGD3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem116A0A0G2JGD3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tmem116A0A0G2JGD3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tmem116A0A0G2JGD3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tmem116A0A0G2JGD3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
Tmem116A0A0G2JGD3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem116A0A0G2JGD3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem116A0A0G2JGD3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem116A0A0G2JGD3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem116A0A0G2JGD3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 125.7 ms