Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav7-5A0A0G2JFX6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav7-5A0A0G2JFX6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav7-5A0A0G2JFX6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav7-5A0A0G2JFX6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Trav7-5A0A0G2JFX6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav7-5A0A0G2JFX6 Zfp131-205ENSMUST00000223812 663 ntBASIC19.74■□□□□ 0.75
Trav7-5A0A0G2JFX6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav7-5A0A0G2JFX6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav7-5A0A0G2JFX6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7-5A0A0G2JFX6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trav7-5A0A0G2JFX6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7-5A0A0G2JFX6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.71■□□□□ 0.75
Trav7-5A0A0G2JFX6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav7-5A0A0G2JFX6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav7-5A0A0G2JFX6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav7-5A0A0G2JFX6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav7-5A0A0G2JFX6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav7-5A0A0G2JFX6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav7-5A0A0G2JFX6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trav7-5A0A0G2JFX6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trav7-5A0A0G2JFX6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav7-5A0A0G2JFX6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav7-5A0A0G2JFX6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav7-5A0A0G2JFX6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav7-5A0A0G2JFX6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav7-5A0A0G2JFX6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav7-5A0A0G2JFX6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav7-5A0A0G2JFX6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav7-5A0A0G2JFX6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.63■□□□□ 0.73
Trav7-5A0A0G2JFX6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav7-5A0A0G2JFX6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav7-5A0A0G2JFX6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trav7-5A0A0G2JFX6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav7-5A0A0G2JFX6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.61■□□□□ 0.73
Trav7-5A0A0G2JFX6 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.61■□□□□ 0.73
Trav7-5A0A0G2JFX6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trav7-5A0A0G2JFX6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav7-5A0A0G2JFX6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.59■□□□□ 0.73
Trav7-5A0A0G2JFX6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav7-5A0A0G2JFX6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav7-5A0A0G2JFX6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav7-5A0A0G2JFX6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav7-5A0A0G2JFX6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav7-5A0A0G2JFX6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav7-5A0A0G2JFX6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Trav7-5A0A0G2JFX6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav7-5A0A0G2JFX6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav7-5A0A0G2JFX6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav7-5A0A0G2JFX6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav7-5A0A0G2JFX6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav7-5A0A0G2JFX6 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.52■□□□□ 0.72
Trav7-5A0A0G2JFX6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.52■□□□□ 0.72
Trav7-5A0A0G2JFX6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav7-5A0A0G2JFX6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav7-5A0A0G2JFX6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav7-5A0A0G2JFX6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav7-5A0A0G2JFX6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav7-5A0A0G2JFX6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav7-5A0A0G2JFX6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav7-5A0A0G2JFX6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav7-5A0A0G2JFX6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav7-5A0A0G2JFX6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav7-5A0A0G2JFX6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav7-5A0A0G2JFX6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav7-5A0A0G2JFX6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.47■□□□□ 0.71
Trav7-5A0A0G2JFX6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav7-5A0A0G2JFX6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trav7-5A0A0G2JFX6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7-5A0A0G2JFX6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7-5A0A0G2JFX6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav7-5A0A0G2JFX6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trav7-5A0A0G2JFX6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav7-5A0A0G2JFX6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav7-5A0A0G2JFX6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.42■□□□□ 0.7
Trav7-5A0A0G2JFX6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7-5A0A0G2JFX6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7-5A0A0G2JFX6 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.4■□□□□ 0.7
Trav7-5A0A0G2JFX6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7-5A0A0G2JFX6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7-5A0A0G2JFX6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trav7-5A0A0G2JFX6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7-5A0A0G2JFX6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav7-5A0A0G2JFX6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7-5A0A0G2JFX6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Gm9397-201ENSMUST00000200125 605 ntBASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-5A0A0G2JFX6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav7-5A0A0G2JFX6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav7-5A0A0G2JFX6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav7-5A0A0G2JFX6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7-5A0A0G2JFX6 Gm45855-201ENSMUST00000212546 880 ntBASIC19.35■□□□□ 0.69
Trav7-5A0A0G2JFX6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trav7-5A0A0G2JFX6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trav7-5A0A0G2JFX6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms