Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Atg4a-psA0A0G2JFS9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.39■■■□□ 2.62
Atg4a-psA0A0G2JFS9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Atg4a-psA0A0G2JFS9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Atg4a-psA0A0G2JFS9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Atg4a-psA0A0G2JFS9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Atg4a-psA0A0G2JFS9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Atg4a-psA0A0G2JFS9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Atg4a-psA0A0G2JFS9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Atg4a-psA0A0G2JFS9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Atg4a-psA0A0G2JFS9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Atg4a-psA0A0G2JFS9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Atg4a-psA0A0G2JFS9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Atg4a-psA0A0G2JFS9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.27■■■□□ 2.6
Atg4a-psA0A0G2JFS9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Atg4a-psA0A0G2JFS9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
Atg4a-psA0A0G2JFS9 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.25■■■□□ 2.59
Atg4a-psA0A0G2JFS9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.24■■■□□ 2.59
Atg4a-psA0A0G2JFS9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Atg4a-psA0A0G2JFS9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Atg4a-psA0A0G2JFS9 Gm16148-201ENSMUST00000119653 893 ntBASIC31.2■■■□□ 2.59
Atg4a-psA0A0G2JFS9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Atg4a-psA0A0G2JFS9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Atg4a-psA0A0G2JFS9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Atg4a-psA0A0G2JFS9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
Atg4a-psA0A0G2JFS9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.05■■■□□ 2.56
Atg4a-psA0A0G2JFS9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Zxda-201ENSMUST00000117281 2621 ntBASIC31.02■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Atg4a-psA0A0G2JFS9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Atg4a-psA0A0G2JFS9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Atg4a-psA0A0G2JFS9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
Atg4a-psA0A0G2JFS9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Atg4a-psA0A0G2JFS9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Atg4a-psA0A0G2JFS9 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.92■■■□□ 2.54
Atg4a-psA0A0G2JFS9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Atg4a-psA0A0G2JFS9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Atg4a-psA0A0G2JFS9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Atg4a-psA0A0G2JFS9 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.82■■■□□ 2.52
Atg4a-psA0A0G2JFS9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Atg4a-psA0A0G2JFS9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Atg4a-psA0A0G2JFS9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Atg4a-psA0A0G2JFS9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.78■■■□□ 2.52
Atg4a-psA0A0G2JFS9 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.77■■■□□ 2.52
Atg4a-psA0A0G2JFS9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Atg4a-psA0A0G2JFS9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.72■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.71■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Zfp131-205ENSMUST00000223812 663 ntBASIC30.7■■■□□ 2.51
Atg4a-psA0A0G2JFS9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Atg4a-psA0A0G2JFS9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms