Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-2A0A0G2JF93 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav13n-2A0A0G2JF93 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-2A0A0G2JF93 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav13n-2A0A0G2JF93 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trav13n-2A0A0G2JF93 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trav13n-2A0A0G2JF93 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav13n-2A0A0G2JF93 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-2A0A0G2JF93 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-2A0A0G2JF93 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav13n-2A0A0G2JF93 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-2A0A0G2JF93 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav13n-2A0A0G2JF93 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13n-2A0A0G2JF93 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-2A0A0G2JF93 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav13n-2A0A0G2JF93 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-2A0A0G2JF93 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-2A0A0G2JF93 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav13n-2A0A0G2JF93 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-2A0A0G2JF93 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-2A0A0G2JF93 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav13n-2A0A0G2JF93 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Trav13n-2A0A0G2JF93 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trav13n-2A0A0G2JF93 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trav13n-2A0A0G2JF93 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-2A0A0G2JF93 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-2A0A0G2JF93 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav13n-2A0A0G2JF93 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-2A0A0G2JF93 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-2A0A0G2JF93 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav13n-2A0A0G2JF93 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-2A0A0G2JF93 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-2A0A0G2JF93 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-2A0A0G2JF93 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-2A0A0G2JF93 Gm25238-201ENSMUST00000174914 89 ntBASIC16.44■□□□□ 0.22
Trav13n-2A0A0G2JF93 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13n-2A0A0G2JF93 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-2A0A0G2JF93 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav13n-2A0A0G2JF93 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-2A0A0G2JF93 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-2A0A0G2JF93 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-2A0A0G2JF93 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-2A0A0G2JF93 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav13n-2A0A0G2JF93 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-2A0A0G2JF93 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.4■□□□□ 0.22
Trav13n-2A0A0G2JF93 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-2A0A0G2JF93 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav13n-2A0A0G2JF93 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-2A0A0G2JF93 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-2A0A0G2JF93 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-2A0A0G2JF93 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13n-2A0A0G2JF93 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav13n-2A0A0G2JF93 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-2A0A0G2JF93 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-2A0A0G2JF93 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-2A0A0G2JF93 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav13n-2A0A0G2JF93 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-2A0A0G2JF93 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13n-2A0A0G2JF93 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.35■□□□□ 0.21
Trav13n-2A0A0G2JF93 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13n-2A0A0G2JF93 Mipep-204ENSMUST00000225043 1548 ntBASIC16.34■□□□□ 0.21
Trav13n-2A0A0G2JF93 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav13n-2A0A0G2JF93 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13n-2A0A0G2JF93 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav13n-2A0A0G2JF93 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13n-2A0A0G2JF93 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13n-2A0A0G2JF93 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trav13n-2A0A0G2JF93 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13n-2A0A0G2JF93 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-2A0A0G2JF93 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13n-2A0A0G2JF93 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav13n-2A0A0G2JF93 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13n-2A0A0G2JF93 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13n-2A0A0G2JF93 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13n-2A0A0G2JF93 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13n-2A0A0G2JF93 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13n-2A0A0G2JF93 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-2A0A0G2JF93 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-2A0A0G2JF93 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trav13n-2A0A0G2JF93 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-2A0A0G2JF93 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13n-2A0A0G2JF93 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13n-2A0A0G2JF93 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13n-2A0A0G2JF93 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav13n-2A0A0G2JF93 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms