Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Trav9n-2A0A0G2JDP3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav9n-2A0A0G2JDP3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav9n-2A0A0G2JDP3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.15■□□□□ 0.5
Trav9n-2A0A0G2JDP3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Gm16148-201ENSMUST00000119653 893 ntBASIC18.14■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Zxda-201ENSMUST00000117281 2621 ntBASIC18.14■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav9n-2A0A0G2JDP3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.13■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.12■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.08■□□□□ 0.49
Trav9n-2A0A0G2JDP3 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.08■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.07■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.04■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.03■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav9n-2A0A0G2JDP3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9n-2A0A0G2JDP3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Trav9n-2A0A0G2JDP3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav9n-2A0A0G2JDP3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9n-2A0A0G2JDP3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9n-2A0A0G2JDP3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms