Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-6A0A075B640 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-6A0A075B640 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav7-6A0A075B640 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-6A0A075B640 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav7-6A0A075B640 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav7-6A0A075B640 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-6A0A075B640 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-6A0A075B640 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav7-6A0A075B640 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav7-6A0A075B640 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav7-6A0A075B640 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-6A0A075B640 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-6A0A075B640 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-6A0A075B640 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7-6A0A075B640 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-6A0A075B640 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-6A0A075B640 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trav7-6A0A075B640 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav7-6A0A075B640 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-6A0A075B640 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7-6A0A075B640 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-6A0A075B640 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7-6A0A075B640 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-6A0A075B640 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-6A0A075B640 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7-6A0A075B640 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav7-6A0A075B640 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7-6A0A075B640 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7-6A0A075B640 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Trav7-6A0A075B640 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav7-6A0A075B640 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav7-6A0A075B640 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-6A0A075B640 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-6A0A075B640 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-6A0A075B640 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-6A0A075B640 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-6A0A075B640 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-6A0A075B640 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-6A0A075B640 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav7-6A0A075B640 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav7-6A0A075B640 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav7-6A0A075B640 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-6A0A075B640 Gm26115-201ENSMUST00000175605 87 ntBASIC17.26■□□□□ 0.35
Trav7-6A0A075B640 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav7-6A0A075B640 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-6A0A075B640 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7-6A0A075B640 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav7-6A0A075B640 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-6A0A075B640 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav7-6A0A075B640 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-6A0A075B640 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-6A0A075B640 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-6A0A075B640 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-6A0A075B640 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-6A0A075B640 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-6A0A075B640 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-6A0A075B640 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-6A0A075B640 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-6A0A075B640 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-6A0A075B640 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-6A0A075B640 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav7-6A0A075B640 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trav7-6A0A075B640 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-6A0A075B640 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.21■□□□□ 0.34
Trav7-6A0A075B640 Gm8109-201ENSMUST00000194076 746 ntBASIC17.2■□□□□ 0.34
Trav7-6A0A075B640 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav7-6A0A075B640 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav7-6A0A075B640 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-6A0A075B640 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-6A0A075B640 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-6A0A075B640 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Trav7-6A0A075B640 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-6A0A075B640 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-6A0A075B640 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-6A0A075B640 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-6A0A075B640 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.15■□□□□ 0.34
Trav7-6A0A075B640 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-6A0A075B640 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7-6A0A075B640 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-6A0A075B640 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-6A0A075B640 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-6A0A075B640 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-6A0A075B640 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-6A0A075B640 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-6A0A075B640 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-6A0A075B640 Peli2-204ENSMUST00000226513 1320 ntBASIC17.09■□□□□ 0.33
Trav7-6A0A075B640 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-6A0A075B640 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav7-6A0A075B640 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-6A0A075B640 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-6A0A075B640 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav7-6A0A075B640 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7-6A0A075B640 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms