Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Trav6-7-dv9A0A075B639 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trav6-7-dv9A0A075B639 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trav6-7-dv9A0A075B639 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Trav6-7-dv9A0A075B639 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trav6-7-dv9A0A075B639 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav6-7-dv9A0A075B639 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Trav6-7-dv9A0A075B639 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.45■■□□□ 1.18
Trav6-7-dv9A0A075B639 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.44■■□□□ 1.18
Trav6-7-dv9A0A075B639 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trav6-7-dv9A0A075B639 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trav6-7-dv9A0A075B639 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trav6-7-dv9A0A075B639 Zxda-201ENSMUST00000117281 2621 ntBASIC22.42■■□□□ 1.18
Trav6-7-dv9A0A075B639 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.41■■□□□ 1.18
Trav6-7-dv9A0A075B639 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav6-7-dv9A0A075B639 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav6-7-dv9A0A075B639 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trav6-7-dv9A0A075B639 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav6-7-dv9A0A075B639 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Trav6-7-dv9A0A075B639 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Trav6-7-dv9A0A075B639 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Trav6-7-dv9A0A075B639 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.38■■□□□ 1.17
Trav6-7-dv9A0A075B639 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav6-7-dv9A0A075B639 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav6-7-dv9A0A075B639 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trav6-7-dv9A0A075B639 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trav6-7-dv9A0A075B639 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.36■■□□□ 1.17
Trav6-7-dv9A0A075B639 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trav6-7-dv9A0A075B639 Gm24804-201ENSMUST00000174982 85 ntBASIC22.35■■□□□ 1.17
Trav6-7-dv9A0A075B639 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Trav6-7-dv9A0A075B639 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trav6-7-dv9A0A075B639 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trav6-7-dv9A0A075B639 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trav6-7-dv9A0A075B639 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Trav6-7-dv9A0A075B639 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trav6-7-dv9A0A075B639 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trav6-7-dv9A0A075B639 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav6-7-dv9A0A075B639 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav6-7-dv9A0A075B639 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Trav6-7-dv9A0A075B639 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav6-7-dv9A0A075B639 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav6-7-dv9A0A075B639 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav6-7-dv9A0A075B639 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav6-7-dv9A0A075B639 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav6-7-dv9A0A075B639 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.27■■□□□ 1.16
Trav6-7-dv9A0A075B639 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trav6-7-dv9A0A075B639 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Trav6-7-dv9A0A075B639 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.26■■□□□ 1.15
Trav6-7-dv9A0A075B639 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trav6-7-dv9A0A075B639 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trav6-7-dv9A0A075B639 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trav6-7-dv9A0A075B639 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav6-7-dv9A0A075B639 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav6-7-dv9A0A075B639 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.23■■□□□ 1.15
Trav6-7-dv9A0A075B639 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trav6-7-dv9A0A075B639 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trav6-7-dv9A0A075B639 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trav6-7-dv9A0A075B639 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trav6-7-dv9A0A075B639 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trav6-7-dv9A0A075B639 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav6-7-dv9A0A075B639 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav6-7-dv9A0A075B639 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trav6-7-dv9A0A075B639 Gm16148-201ENSMUST00000119653 893 ntBASIC22.17■■□□□ 1.14
Trav6-7-dv9A0A075B639 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav6-7-dv9A0A075B639 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav6-7-dv9A0A075B639 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trav6-7-dv9A0A075B639 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav6-7-dv9A0A075B639 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trav6-7-dv9A0A075B639 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trav6-7-dv9A0A075B639 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav6-7-dv9A0A075B639 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav6-7-dv9A0A075B639 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav6-7-dv9A0A075B639 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trav6-7-dv9A0A075B639 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trav6-7-dv9A0A075B639 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trav6-7-dv9A0A075B639 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.08■■□□□ 1.13
Trav6-7-dv9A0A075B639 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.07■■□□□ 1.12
Trav6-7-dv9A0A075B639 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav6-7-dv9A0A075B639 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Trav6-7-dv9A0A075B639 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trav6-7-dv9A0A075B639 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Trav6-7-dv9A0A075B639 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trav6-7-dv9A0A075B639 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.05■■□□□ 1.12
Trav6-7-dv9A0A075B639 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav6-7-dv9A0A075B639 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav6-7-dv9A0A075B639 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav6-7-dv9A0A075B639 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22■■□□□ 1.11
Trav6-7-dv9A0A075B639 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Trav6-7-dv9A0A075B639 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22■■□□□ 1.11
Trav6-7-dv9A0A075B639 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.99■■□□□ 1.11
Trav6-7-dv9A0A075B639 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trav6-7-dv9A0A075B639 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav6-7-dv9A0A075B639 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trav6-7-dv9A0A075B639 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav6-7-dv9A0A075B639 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav6-7-dv9A0A075B639 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav6-7-dv9A0A075B639 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav6-7-dv9A0A075B639 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav6-7-dv9A0A075B639 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trav6-7-dv9A0A075B639 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms