Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
RITA1Q96K30 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RITA1Q96K30 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RITA1Q96K30 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RITA1Q96K30 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.44■□□□□ 0.38
RITA1Q96K30 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.44■□□□□ 0.38
RITA1Q96K30 AC008764.7-201ENST00000593779 1081 ntBASIC17.44■□□□□ 0.38
RITA1Q96K30 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RITA1Q96K30 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RITA1Q96K30 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.44■□□□□ 0.38
RITA1Q96K30 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.43■□□□□ 0.38
RITA1Q96K30 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
RITA1Q96K30 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.43■□□□□ 0.38
RITA1Q96K30 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RITA1Q96K30 BX842568.3-201ENST00000418104 571 ntBASIC17.43■□□□□ 0.38
RITA1Q96K30 AC079089.2-201ENST00000531211 1277 ntBASIC17.43■□□□□ 0.38
RITA1Q96K30 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RITA1Q96K30 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.43■□□□□ 0.38
RITA1Q96K30 AC233992.3-201ENST00000607491 485 ntBASIC17.43■□□□□ 0.38
RITA1Q96K30 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.43■□□□□ 0.38
RITA1Q96K30 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.43■□□□□ 0.38
RITA1Q96K30 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RITA1Q96K30 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RITA1Q96K30 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RITA1Q96K30 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RITA1Q96K30 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.42■□□□□ 0.38
RITA1Q96K30 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RITA1Q96K30 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RITA1Q96K30 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RITA1Q96K30 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.42■□□□□ 0.38
RITA1Q96K30 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.42■□□□□ 0.38
RITA1Q96K30 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.42■□□□□ 0.38
RITA1Q96K30 C11orf96-202ENST00000528572 1834 ntBASIC17.42■□□□□ 0.38
RITA1Q96K30 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RITA1Q96K30 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.41■□□□□ 0.38
RITA1Q96K30 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.41■□□□□ 0.38
RITA1Q96K30 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RITA1Q96K30 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.41■□□□□ 0.38
RITA1Q96K30 AC068587.7-201ENST00000641602 218 ntBASIC17.41■□□□□ 0.38
RITA1Q96K30 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RITA1Q96K30 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
RITA1Q96K30 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
RITA1Q96K30 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.4■□□□□ 0.38
RITA1Q96K30 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RITA1Q96K30 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RITA1Q96K30 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RITA1Q96K30 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RITA1Q96K30 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 AC010141.3-201ENST00000456659 717 ntBASIC17.4■□□□□ 0.38
RITA1Q96K30 AP005435.1-201ENST00000529293 1178 ntBASIC17.4■□□□□ 0.38
RITA1Q96K30 AL031432.3-201ENST00000607698 485 ntBASIC17.4■□□□□ 0.38
RITA1Q96K30 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RITA1Q96K30 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RITA1Q96K30 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.4■□□□□ 0.38
RITA1Q96K30 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RITA1Q96K30 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RITA1Q96K30 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RITA1Q96K30 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RITA1Q96K30 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RITA1Q96K30 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RITA1Q96K30 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RITA1Q96K30 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RITA1Q96K30 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms