Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cps1Q8C196 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cps1Q8C196 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cps1Q8C196 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cps1Q8C196 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
Cps1Q8C196 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cps1Q8C196 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cps1Q8C196 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cps1Q8C196 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cps1Q8C196 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cps1Q8C196 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Snhg20-203ENSMUST00000182811 2153 ntBASIC26.28■■□□□ 1.8
Cps1Q8C196 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Gm10698-201ENSMUST00000182663 604 ntBASIC26.28■■□□□ 1.8
Cps1Q8C196 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC26.28■■□□□ 1.8
Cps1Q8C196 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cps1Q8C196 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cps1Q8C196 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cps1Q8C196 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cps1Q8C196 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cps1Q8C196 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cps1Q8C196 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cps1Q8C196 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.8
Cps1Q8C196 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cps1Q8C196 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
Cps1Q8C196 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cps1Q8C196 Gm715-201ENSMUST00000117865 831 ntBASIC26.26■■□□□ 1.79
Cps1Q8C196 AC135963.1-201ENSMUST00000211640 717 ntBASIC26.26■■□□□ 1.79
Cps1Q8C196 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC26.26■■□□□ 1.79
Cps1Q8C196 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cps1Q8C196 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cps1Q8C196 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cps1Q8C196 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cps1Q8C196 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cps1Q8C196 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Cps1Q8C196 Gm13836-201ENSMUST00000121159 501 ntBASIC26.25■■□□□ 1.79
Cps1Q8C196 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC26.25■■□□□ 1.79
Cps1Q8C196 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Cps1Q8C196 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC26.25■■□□□ 1.79
Cps1Q8C196 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Cps1Q8C196 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Cps1Q8C196 Gm11249-201ENSMUST00000117071 859 ntBASIC26.24■■□□□ 1.79
Cps1Q8C196 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cps1Q8C196 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cps1Q8C196 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cps1Q8C196 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cps1Q8C196 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cps1Q8C196 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cps1Q8C196 Gm26971-201ENSMUST00000182423 1072 ntBASIC26.24■■□□□ 1.79
Cps1Q8C196 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cps1Q8C196 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cps1Q8C196 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cps1Q8C196 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cps1Q8C196 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cps1Q8C196 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Cps1Q8C196 Gm32699-201ENSMUST00000221728 1988 ntBASIC26.22■■□□□ 1.79
Cps1Q8C196 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cps1Q8C196 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cps1Q8C196 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Cps1Q8C196 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC26.21■■□□□ 1.79
Cps1Q8C196 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Cps1Q8C196 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Cps1Q8C196 Gm6576-201ENSMUST00000169678 883 ntBASIC26.2■■□□□ 1.79
Cps1Q8C196 Gm29994-201ENSMUST00000195495 1193 ntBASIC26.2■■□□□ 1.79
Cps1Q8C196 Gm44549-201ENSMUST00000208351 577 ntBASIC26.2■■□□□ 1.79
Cps1Q8C196 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Cps1Q8C196 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cps1Q8C196 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC26.2■■□□□ 1.78
Cps1Q8C196 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cps1Q8C196 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Cps1Q8C196 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Cps1Q8C196 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Cps1Q8C196 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Cps1Q8C196 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC26.2■■□□□ 1.78
Cps1Q8C196 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Cps1Q8C196 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 Gm43672-201ENSMUST00000199072 1731 ntBASIC26.19■■□□□ 1.78
Cps1Q8C196 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cps1Q8C196 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cps1Q8C196 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cps1Q8C196 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cps1Q8C196 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cps1Q8C196 Gm2399-201ENSMUST00000104944 225 ntBASIC26.18■■□□□ 1.78
Cps1Q8C196 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC26.18■■□□□ 1.78
Cps1Q8C196 AC153881.1-201ENSMUST00000214448 284 ntBASIC26.18■■□□□ 1.78
Cps1Q8C196 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cps1Q8C196 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cps1Q8C196 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cps1Q8C196 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms