Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smco3Q8BQM7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Gm12366-201ENSMUST00000121722 873 ntBASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Gm5786-201ENSMUST00000085368 882 ntBASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smco3Q8BQM7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smco3Q8BQM7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smco3Q8BQM7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smco3Q8BQM7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smco3Q8BQM7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms