Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smg1Q8BKX6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Mir1199-201ENSMUST00000117015 119 ntBASIC16.48■□□□□ 0.23
Smg1Q8BKX6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smg1Q8BKX6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Gm12896-201ENSMUST00000118430 226 ntBASIC16.47■□□□□ 0.23
Smg1Q8BKX6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Gm37055-201ENSMUST00000191866 133 ntBASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smg1Q8BKX6 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smg1Q8BKX6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Smg1Q8BKX6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Smg1Q8BKX6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smg1Q8BKX6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smg1Q8BKX6 Gm43799-201ENSMUST00000201845 579 ntBASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Smg1Q8BKX6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Mir5122-201ENSMUST00000175004 89 ntBASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Gm7367-201ENSMUST00000057611 492 ntBASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smg1Q8BKX6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Gm38205-201ENSMUST00000192243 258 ntBASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Gm6659-201ENSMUST00000174752 547 ntBASIC16.42■□□□□ 0.22
Smg1Q8BKX6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Gm10698-201ENSMUST00000182663 604 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms