Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC004854.2-201ENST00000608450 1441 ntBASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 AP004607.4-201ENST00000530158 1459 ntBASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
UBE3BQ7Z3V4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBE3BQ7Z3V4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
UBE3BQ7Z3V4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.17■■□□□ 1.94
UBE3BQ7Z3V4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.17■■□□□ 1.94
UBE3BQ7Z3V4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.17■■□□□ 1.94
UBE3BQ7Z3V4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 AC087742.1-201ENST00000575880 1738 ntBASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
UBE3BQ7Z3V4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 DUSP8P5-201ENST00000422884 1815 ntBASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
UBE3BQ7Z3V4 AC005224.4-201ENST00000583262 1652 ntBASIC27.14■■□□□ 1.94
UBE3BQ7Z3V4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
UBE3BQ7Z3V4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
UBE3BQ7Z3V4 AC004911.1-201ENST00000416316 871 ntBASIC27.14■■□□□ 1.94
UBE3BQ7Z3V4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 LINC00526-201ENST00000581067 1875 ntBASIC27.13■■□□□ 1.93
UBE3BQ7Z3V4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
UBE3BQ7Z3V4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 AC079140.4-201ENST00000507448 529 ntBASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
UBE3BQ7Z3V4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 RARRES2P11-201ENST00000635158 484 ntBASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.1■■□□□ 1.93
UBE3BQ7Z3V4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 AC009237.3-201ENST00000393279 1427 ntBASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 C9orf163-202ENST00000624034 2573 ntBASIC27.09■■□□□ 1.93
UBE3BQ7Z3V4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 AC137767.1-201ENST00000602918 1920 ntBASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.08■■□□□ 1.93
UBE3BQ7Z3V4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms