Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 AC092437.1-201ENST00000624794 1048 ntBASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3F3CQ6NXT2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.05■□□□□ 0.8
H3F3CQ6NXT2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 AL137784.2-201ENST00000607332 1000 ntBASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 LINC01960-201ENST00000563759 1884 ntBASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3F3CQ6NXT2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 AC079089.2-201ENST00000531211 1277 ntBASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
H3F3CQ6NXT2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 KRT18P61-201ENST00000585825 1298 ntBASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 AP004607.4-201ENST00000530158 1459 ntBASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.02■□□□□ 0.8
H3F3CQ6NXT2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
H3F3CQ6NXT2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
H3F3CQ6NXT2 CLDN5-201ENST00000403084 2357 ntBASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H3F3CQ6NXT2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
H3F3CQ6NXT2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 AC009237.3-201ENST00000393279 1427 ntBASIC20■□□□□ 0.79
H3F3CQ6NXT2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3F3CQ6NXT2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms