Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC144NLQ6NUI1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 MIR572-201ENST00000384983 95 ntBASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC144NLQ6NUI1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 OR7E47P-201ENST00000546390 1422 ntBASIC17.52■□□□□ 0.4
CCDC144NLQ6NUI1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC144NLQ6NUI1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC144NLQ6NUI1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC144NLQ6NUI1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC144NLQ6NUI1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 IRS3P-201ENST00000223076 1006 ntBASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 AL034346.1-201ENST00000568244 1277 ntBASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC144NLQ6NUI1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 AL354811.1-201ENST00000610286 706 ntBASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 AL358852.1-201ENST00000623174 1268 ntBASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 AC105233.4-201ENST00000642045 216 ntBASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 AC137767.1-201ENST00000602918 1920 ntBASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC144NLQ6NUI1 AC019069.1-201ENST00000610008 1333 ntBASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC144NLQ6NUI1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms