Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Six3Q62233 Gm21956-201ENSMUST00000179946 522 ntBASIC18.75■□□□□ 0.59
Six3Q62233 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.75■□□□□ 0.59
Six3Q62233 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six3Q62233 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six3Q62233 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six3Q62233 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.74■□□□□ 0.59
Six3Q62233 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six3Q62233 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.74■□□□□ 0.59
Six3Q62233 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six3Q62233 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six3Q62233 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Six3Q62233 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Six3Q62233 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.73■□□□□ 0.59
Six3Q62233 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.73■□□□□ 0.59
Six3Q62233 Spcs1-204ENSMUST00000226782 949 ntBASIC18.73■□□□□ 0.59
Six3Q62233 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Six3Q62233 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
Six3Q62233 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six3Q62233 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 Gm12251-201ENSMUST00000117893 792 ntBASIC18.72■□□□□ 0.59
Six3Q62233 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.72■□□□□ 0.59
Six3Q62233 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.72■□□□□ 0.59
Six3Q62233 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six3Q62233 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Six3Q62233 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Six3Q62233 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six3Q62233 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Six3Q62233 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
Six3Q62233 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Six3Q62233 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Six3Q62233 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Six3Q62233 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.7■□□□□ 0.58
Six3Q62233 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.7■□□□□ 0.58
Six3Q62233 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Six3Q62233 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six3Q62233 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Six3Q62233 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Six3Q62233 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six3Q62233 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.69■□□□□ 0.58
Six3Q62233 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.68■□□□□ 0.58
Six3Q62233 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.68■□□□□ 0.58
Six3Q62233 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.68■□□□□ 0.58
Six3Q62233 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.68■□□□□ 0.58
Six3Q62233 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms