Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnga4Q3UW12 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.47■□□□□ 0.71
Cnga4Q3UW12 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Gm40881-201ENSMUST00000223397 166 ntBASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnga4Q3UW12 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnga4Q3UW12 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnga4Q3UW12 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnga4Q3UW12 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnga4Q3UW12 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cnga4Q3UW12 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms