Protein–RNA interactions for Protein: Q3TS39

1700066B19Rik, RIKEN cDNA 1700066B19 gene, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700066B19RikQ3TS39 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
1700066B19RikQ3TS39 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
1700066B19RikQ3TS39 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
1700066B19RikQ3TS39 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
1700066B19RikQ3TS39 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.82■□□□□ 0.44
1700066B19RikQ3TS39 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Iqck-206ENSMUST00000208658 2891 ntBASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Gm40848-201ENSMUST00000221998 324 ntBASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
1700066B19RikQ3TS39 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Gm43060-201ENSMUST00000200621 289 ntBASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
1700066B19RikQ3TS39 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
1700066B19RikQ3TS39 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
1700066B19RikQ3TS39 Gm7860-201ENSMUST00000121190 879 ntBASIC17.79■□□□□ 0.44
1700066B19RikQ3TS39 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.79■□□□□ 0.44
1700066B19RikQ3TS39 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
1700066B19RikQ3TS39 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms