Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 RARRES2P6-201ENST00000567333 442 ntBASIC21.84■■□□□ 1.09
CSNK1DP48730 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.84■■□□□ 1.09
CSNK1DP48730 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1DP48730 TPRG1LP1-201ENST00000598702 760 ntBASIC21.84■■□□□ 1.09
CSNK1DP48730 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1DP48730 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1DP48730 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1DP48730 MIR935-201ENST00000401179 91 ntBASIC21.83■■□□□ 1.09
CSNK1DP48730 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1DP48730 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.83■■□□□ 1.09
CSNK1DP48730 AL034346.1-201ENST00000568244 1277 ntBASIC21.83■■□□□ 1.09
CSNK1DP48730 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1DP48730 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1DP48730 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.83■■□□□ 1.09
CSNK1DP48730 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSNK1DP48730 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSNK1DP48730 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.83■■□□□ 1.08
CSNK1DP48730 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CSNK1DP48730 AC009237.3-201ENST00000393279 1427 ntBASIC21.82■■□□□ 1.08
CSNK1DP48730 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1DP48730 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CSNK1DP48730 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CSNK1DP48730 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.82■■□□□ 1.08
CSNK1DP48730 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CSNK1DP48730 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CSNK1DP48730 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1DP48730 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1DP48730 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.82■■□□□ 1.08
CSNK1DP48730 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 AC012676.1-201ENST00000574705 1949 ntBASIC21.81■■□□□ 1.08
CSNK1DP48730 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CSNK1DP48730 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CSNK1DP48730 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.81■■□□□ 1.08
CSNK1DP48730 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1DP48730 LINC02228-203ENST00000641970 1355 ntBASIC21.81■■□□□ 1.08
CSNK1DP48730 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1DP48730 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1DP48730 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1DP48730 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CSNK1DP48730 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1DP48730 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1DP48730 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1DP48730 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.8■■□□□ 1.08
CSNK1DP48730 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.8■■□□□ 1.08
CSNK1DP48730 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1DP48730 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1DP48730 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CSNK1DP48730 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.79■■□□□ 1.08
CSNK1DP48730 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1DP48730 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1DP48730 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.79■■□□□ 1.08
CSNK1DP48730 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.79■■□□□ 1.08
CSNK1DP48730 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 AC080038.3-201ENST00000623346 1952 ntBASIC21.79■■□□□ 1.08
CSNK1DP48730 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSNK1DP48730 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1DP48730 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.79■■□□□ 1.08
CSNK1DP48730 AP004607.7-201ENST00000527152 1677 ntBASIC21.79■■□□□ 1.08
CSNK1DP48730 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1DP48730 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1DP48730 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.78■■□□□ 1.08
CSNK1DP48730 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1DP48730 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1DP48730 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CSNK1DP48730 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CSNK1DP48730 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.78■■□□□ 1.08
CSNK1DP48730 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.78■■□□□ 1.08
CSNK1DP48730 TERF1P2-201ENST00000583350 1212 ntBASIC21.78■■□□□ 1.08
CSNK1DP48730 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.78■■□□□ 1.08
CSNK1DP48730 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CSNK1DP48730 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1DP48730 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1DP48730 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CSNK1DP48730 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1DP48730 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1DP48730 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.77■■□□□ 1.08
CSNK1DP48730 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1DP48730 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms