Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ACANP16112 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 AC068338.2-201ENST00000563278 1430 ntBASIC18■□□□□ 0.47
ACANP16112 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18■□□□□ 0.47
ACANP16112 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ACANP16112 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18■□□□□ 0.47
ACANP16112 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18■□□□□ 0.47
ACANP16112 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
ACANP16112 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ACANP16112 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACANP16112 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.99■□□□□ 0.47
ACANP16112 AC073912.3-201ENST00000624414 853 ntBASIC17.99■□□□□ 0.47
ACANP16112 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.99■□□□□ 0.47
ACANP16112 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACANP16112 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ACANP16112 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.99■□□□□ 0.47
ACANP16112 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
ACANP16112 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.99■□□□□ 0.47
ACANP16112 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.99■□□□□ 0.47
ACANP16112 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ACANP16112 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ACANP16112 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACANP16112 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.98■□□□□ 0.47
ACANP16112 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACANP16112 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ACANP16112 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ACANP16112 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACANP16112 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ACANP16112 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACANP16112 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.98■□□□□ 0.47
ACANP16112 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ACANP16112 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.98■□□□□ 0.47
ACANP16112 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.98■□□□□ 0.47
ACANP16112 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.97■□□□□ 0.47
ACANP16112 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ACANP16112 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.97■□□□□ 0.47
ACANP16112 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.97■□□□□ 0.47
ACANP16112 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.97■□□□□ 0.47
ACANP16112 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.97■□□□□ 0.47
ACANP16112 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.97■□□□□ 0.47
ACANP16112 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.97■□□□□ 0.47
ACANP16112 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.97■□□□□ 0.47
ACANP16112 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ACANP16112 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.97■□□□□ 0.47
ACANP16112 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.97■□□□□ 0.47
ACANP16112 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACANP16112 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.97■□□□□ 0.47
ACANP16112 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.97■□□□□ 0.47
ACANP16112 AC016405.3-201ENST00000607710 860 ntBASIC17.97■□□□□ 0.47
ACANP16112 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ACANP16112 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ACANP16112 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ACANP16112 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACANP16112 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACANP16112 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ACANP16112 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.96■□□□□ 0.47
ACANP16112 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACANP16112 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACANP16112 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.96■□□□□ 0.47
ACANP16112 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.96■□□□□ 0.47
ACANP16112 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
ACANP16112 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ACANP16112 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.96■□□□□ 0.46
ACANP16112 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.96■□□□□ 0.46
ACANP16112 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.95■□□□□ 0.46
ACANP16112 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 AC026366.1-201ENST00000488803 879 ntBASIC17.95■□□□□ 0.46
ACANP16112 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ACANP16112 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACANP16112 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ACANP16112 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACANP16112 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ACANP16112 AC010331.1-201ENST00000611423 582 ntBASIC17.94■□□□□ 0.46
ACANP16112 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.94■□□□□ 0.46
ACANP16112 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACANP16112 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACANP16112 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms