Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PF4V1P10720 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.11■□□□□ 0.33
PF4V1P10720 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
PF4V1P10720 AP005435.1-201ENST00000529293 1178 ntBASIC17.11■□□□□ 0.33
PF4V1P10720 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.11■□□□□ 0.33
PF4V1P10720 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.11■□□□□ 0.33
PF4V1P10720 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PF4V1P10720 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.11■□□□□ 0.33
PF4V1P10720 C9orf163-202ENST00000624034 2573 ntBASIC17.11■□□□□ 0.33
PF4V1P10720 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PF4V1P10720 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PF4V1P10720 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PF4V1P10720 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PF4V1P10720 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.1■□□□□ 0.33
PF4V1P10720 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.1■□□□□ 0.33
PF4V1P10720 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PF4V1P10720 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PF4V1P10720 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.1■□□□□ 0.33
PF4V1P10720 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
PF4V1P10720 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.1■□□□□ 0.33
PF4V1P10720 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PF4V1P10720 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PF4V1P10720 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.1■□□□□ 0.33
PF4V1P10720 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.1■□□□□ 0.33
PF4V1P10720 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.1■□□□□ 0.33
PF4V1P10720 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.1■□□□□ 0.33
PF4V1P10720 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.09■□□□□ 0.33
PF4V1P10720 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.09■□□□□ 0.33
PF4V1P10720 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PF4V1P10720 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 AC123595.1-201ENST00000440769 1046 ntBASIC17.09■□□□□ 0.33
PF4V1P10720 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.09■□□□□ 0.33
PF4V1P10720 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.09■□□□□ 0.33
PF4V1P10720 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PF4V1P10720 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.09■□□□□ 0.33
PF4V1P10720 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PF4V1P10720 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PF4V1P10720 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PF4V1P10720 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PF4V1P10720 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PF4V1P10720 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PF4V1P10720 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PF4V1P10720 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PF4V1P10720 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.08■□□□□ 0.32
PF4V1P10720 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.08■□□□□ 0.32
PF4V1P10720 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PF4V1P10720 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PF4V1P10720 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PF4V1P10720 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PF4V1P10720 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PF4V1P10720 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.08■□□□□ 0.32
PF4V1P10720 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.08■□□□□ 0.32
PF4V1P10720 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.08■□□□□ 0.32
PF4V1P10720 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.08■□□□□ 0.32
PF4V1P10720 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.08■□□□□ 0.32
PF4V1P10720 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
PF4V1P10720 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PF4V1P10720 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PF4V1P10720 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PF4V1P10720 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.07■□□□□ 0.32
PF4V1P10720 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.07■□□□□ 0.32
PF4V1P10720 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.07■□□□□ 0.32
PF4V1P10720 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.07■□□□□ 0.32
PF4V1P10720 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.07■□□□□ 0.32
PF4V1P10720 AC010141.3-201ENST00000456659 717 ntBASIC17.07■□□□□ 0.32
PF4V1P10720 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.07■□□□□ 0.32
PF4V1P10720 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PF4V1P10720 AL031602.1-201ENST00000633169 911 ntBASIC17.07■□□□□ 0.32
PF4V1P10720 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PF4V1P10720 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PF4V1P10720 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.07■□□□□ 0.32
PF4V1P10720 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PF4V1P10720 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.06■□□□□ 0.32
PF4V1P10720 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PF4V1P10720 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms