Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CCNYL3P0C7X3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.85■□□□□ 0.93
CCNYL3P0C7X3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 NTF6G-201ENST00000591094 616 ntBASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCNYL3P0C7X3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 AC068587.7-201ENST00000641602 218 ntBASIC20.83■□□□□ 0.93
CCNYL3P0C7X3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CCNYL3P0C7X3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCNYL3P0C7X3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 TERF1P2-201ENST00000583350 1212 ntBASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 RARRES2P11-201ENST00000635158 484 ntBASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.82■□□□□ 0.92
CCNYL3P0C7X3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 AC087239.1-201ENST00000622671 572 ntBASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCNYL3P0C7X3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 AC090192.1-201ENST00000517740 490 ntBASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCNYL3P0C7X3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms