Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL2A1P02458 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL2A1P02458 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL2A1P02458 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL2A1P02458 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.6■■□□□ 1.69
COL2A1P02458 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
COL2A1P02458 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.6■■□□□ 1.69
COL2A1P02458 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.6■■□□□ 1.69
COL2A1P02458 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.6■■□□□ 1.69
COL2A1P02458 AC011767.1-201ENST00000617410 1153 ntBASIC25.6■■□□□ 1.69
COL2A1P02458 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.6■■□□□ 1.69
COL2A1P02458 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.6■■□□□ 1.69
COL2A1P02458 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.6■■□□□ 1.69
COL2A1P02458 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL2A1P02458 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.6■■□□□ 1.69
COL2A1P02458 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.6■■□□□ 1.69
COL2A1P02458 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.6■■□□□ 1.69
COL2A1P02458 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.6■■□□□ 1.69
COL2A1P02458 DUSP8P5-201ENST00000422884 1815 ntBASIC25.59■■□□□ 1.69
COL2A1P02458 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
COL2A1P02458 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.59■■□□□ 1.69
COL2A1P02458 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.59■■□□□ 1.69
COL2A1P02458 MIR663A-201ENST00000385250 93 ntBASIC25.59■■□□□ 1.69
COL2A1P02458 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL2A1P02458 AL034346.1-201ENST00000568244 1277 ntBASIC25.59■■□□□ 1.69
COL2A1P02458 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL2A1P02458 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.58■■□□□ 1.69
COL2A1P02458 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL2A1P02458 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL2A1P02458 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL2A1P02458 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL2A1P02458 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.58■■□□□ 1.69
COL2A1P02458 AC104771.1-201ENST00000603335 964 ntBASIC25.58■■□□□ 1.69
COL2A1P02458 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.58■■□□□ 1.69
COL2A1P02458 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
COL2A1P02458 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
COL2A1P02458 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL2A1P02458 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
COL2A1P02458 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL2A1P02458 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.57■■□□□ 1.68
COL2A1P02458 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL2A1P02458 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.57■■□□□ 1.68
COL2A1P02458 UBE2DNL-204ENST00000602536 740 ntBASIC25.57■■□□□ 1.68
COL2A1P02458 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL2A1P02458 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL2A1P02458 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.56■■□□□ 1.68
COL2A1P02458 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
COL2A1P02458 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL2A1P02458 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL2A1P02458 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.56■■□□□ 1.68
COL2A1P02458 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.56■■□□□ 1.68
COL2A1P02458 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.56■■□□□ 1.68
COL2A1P02458 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL2A1P02458 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.56■■□□□ 1.68
COL2A1P02458 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL2A1P02458 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL2A1P02458 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.55■■□□□ 1.68
COL2A1P02458 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.55■■□□□ 1.68
COL2A1P02458 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL2A1P02458 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COL2A1P02458 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
COL2A1P02458 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL2A1P02458 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL2A1P02458 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL2A1P02458 NCF1B-203ENST00000435988 1254 ntBASIC25.54■■□□□ 1.68
COL2A1P02458 AC006970.2-201ENST00000450065 779 ntBASIC25.54■■□□□ 1.68
COL2A1P02458 AC010141.2-201ENST00000452426 721 ntBASIC25.54■■□□□ 1.68
COL2A1P02458 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.54■■□□□ 1.68
COL2A1P02458 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL2A1P02458 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL2A1P02458 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL2A1P02458 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL2A1P02458 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.53■■□□□ 1.68
COL2A1P02458 MYCNOS-205ENST00000641950 531 ntBASIC25.53■■□□□ 1.68
COL2A1P02458 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
COL2A1P02458 OR7E47P-201ENST00000546390 1422 ntBASIC25.53■■□□□ 1.68
COL2A1P02458 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.53■■□□□ 1.68
COL2A1P02458 LINC00526-201ENST00000581067 1875 ntBASIC25.53■■□□□ 1.68
COL2A1P02458 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL2A1P02458 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL2A1P02458 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.53■■□□□ 1.68
COL2A1P02458 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.53■■□□□ 1.68
COL2A1P02458 AC138907.5-202ENST00000569484 235 ntBASIC25.53■■□□□ 1.68
COL2A1P02458 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.53■■□□□ 1.68
COL2A1P02458 AP004607.7-201ENST00000527152 1677 ntBASIC25.52■■□□□ 1.68
COL2A1P02458 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL2A1P02458 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL2A1P02458 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL2A1P02458 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.52■■□□□ 1.68
COL2A1P02458 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL2A1P02458 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.52■■□□□ 1.68
COL2A1P02458 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms