Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.4■□□□□ 0.38
Pcdh12O55134 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh12O55134 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdh12O55134 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh12O55134 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh12O55134 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh12O55134 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh12O55134 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh12O55134 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh12O55134 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pcdh12O55134 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.39■□□□□ 0.37
Pcdh12O55134 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Pcdh12O55134 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
Pcdh12O55134 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdh12O55134 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pcdh12O55134 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdh12O55134 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh12O55134 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh12O55134 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh12O55134 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh12O55134 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh12O55134 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh12O55134 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh12O55134 Golph3-205ENSMUST00000228671 2842 ntBASIC17.38■□□□□ 0.37
Pcdh12O55134 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Pcdh12O55134 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh12O55134 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh12O55134 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh12O55134 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh12O55134 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdh12O55134 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Pcdh12O55134 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh12O55134 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh12O55134 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh12O55134 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdh12O55134 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pcdh12O55134 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Gm43060-201ENSMUST00000200621 289 ntBASIC17.35■□□□□ 0.37
Pcdh12O55134 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh12O55134 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh12O55134 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh12O55134 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh12O55134 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdh12O55134 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh12O55134 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh12O55134 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh12O55134 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh12O55134 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcdh12O55134 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh12O55134 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh12O55134 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdh12O55134 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh12O55134 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh12O55134 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh12O55134 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh12O55134 Gm11421-201ENSMUST00000122124 294 ntBASIC17.33■□□□□ 0.36
Pcdh12O55134 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh12O55134 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh12O55134 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh12O55134 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.33■□□□□ 0.36
Pcdh12O55134 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdh12O55134 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh12O55134 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Gm40848-201ENSMUST00000221998 324 ntBASIC17.32■□□□□ 0.36
Pcdh12O55134 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh12O55134 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms