Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Efnb3O35393 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Efnb3O35393 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Efnb3O35393 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Efnb3O35393 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Gm7417-201ENSMUST00000192950 473 ntBASIC15.13■□□□□ 0.01
Efnb3O35393 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.13■□□□□ 0.01
Efnb3O35393 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.13■□□□□ 0.01
Efnb3O35393 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.13■□□□□ 0.01
Efnb3O35393 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.13■□□□□ 0.01
Efnb3O35393 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Efnb3O35393 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Efnb3O35393 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Efnb3O35393 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Etf1-202ENSMUST00000180351 108 ntBASIC15.12■□□□□ 0.01
Efnb3O35393 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.12■□□□□ 0.01
Efnb3O35393 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.12■□□□□ 0.01
Efnb3O35393 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.12■□□□□ 0.01
Efnb3O35393 Gm9959-201ENSMUST00000068277 390 ntBASIC15.12■□□□□ 0.01
Efnb3O35393 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.12■□□□□ 0.01
Efnb3O35393 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
Efnb3O35393 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Efnb3O35393 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.11■□□□□ 0.01
Efnb3O35393 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Efnb3O35393 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.11■□□□□ 0.01
Efnb3O35393 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Efnb3O35393 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.1■□□□□ 0.01
Efnb3O35393 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Efnb3O35393 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.1■□□□□ 0.01
Efnb3O35393 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.1■□□□□ 0.01
Efnb3O35393 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Efnb3O35393 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Efnb3O35393 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Efnb3O35393 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.09■□□□□ 0.01
Efnb3O35393 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
Efnb3O35393 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.09■□□□□ 0.01
Efnb3O35393 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.09■□□□□ 0.01
Efnb3O35393 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Gm9870-201ENSMUST00000063874 645 ntBASIC15.09■□□□□ 0.01
Efnb3O35393 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Efnb3O35393 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.08■□□□□ 0
Efnb3O35393 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Efnb3O35393 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.08■□□□□ 0
Efnb3O35393 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Efnb3O35393 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Efnb3O35393 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Efnb3O35393 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms