Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Gm42939-201ENSMUST00000197514 2205 ntBASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3880A0A1B0GSB3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Gm5131-201ENSMUST00000212776 1238 ntBASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3880A0A1B0GSB3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm3880A0A1B0GSB3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Gm45141-201ENSMUST00000206502 1888 ntBASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Gm3880A0A1B0GSB3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Gm3880A0A1B0GSB3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Fst-202ENSMUST00000223640 2612 ntBASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Gm3880A0A1B0GSB3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm3880A0A1B0GSB3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms