Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Frmpd3A0A140LIW3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Frmpd3A0A140LIW3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Gm18666-201ENSMUST00000190039 958 ntBASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Frmpd3A0A140LIW3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Gm43799-201ENSMUST00000201845 579 ntBASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Gm44549-201ENSMUST00000208351 577 ntBASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Gm9987-201ENSMUST00000069768 567 ntBASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Frmpd3A0A140LIW3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Frmpd3A0A140LIW3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.21■■□□□ 1.31
Frmpd3A0A140LIW3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Frmpd3A0A140LIW3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Frmpd3A0A140LIW3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Frmpd3A0A140LIW3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Frmpd3A0A140LIW3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Gm13158-201ENSMUST00000122007 736 ntBASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Frmpd3A0A140LIW3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Gm15378-201ENSMUST00000121894 207 ntBASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Frmpd3A0A140LIW3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Gm10231-201ENSMUST00000181584 441 ntBASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Gm10175-202ENSMUST00000208752 441 ntBASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Gm10819-201ENSMUST00000099988 561 ntBASIC23.17■■□□□ 1.3
Frmpd3A0A140LIW3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Frmpd3A0A140LIW3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Frmpd3A0A140LIW3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms