Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.21□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm7417-201ENSMUST00000192950 473 ntBASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13d-4A0A0G2JFX3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms