Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 MIR3621-201ENST00000580529 85 ntBASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAV27A0A087WT01 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAV27A0A087WT01 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 AL031602.1-201ENST00000633169 911 ntBASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV27A0A087WT01 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAV27A0A087WT01 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 AC026310.3-201ENST00000625186 2373 ntBASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV27A0A087WT01 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV27A0A087WT01 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 SRD5A1P1-201ENST00000442297 786 ntBASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 MIR3181-201ENST00000578512 73 ntBASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV27A0A087WT01 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms