Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-4A0A075B654 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-4A0A075B654 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-4A0A075B654 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav3-4A0A075B654 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav3-4A0A075B654 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav3-4A0A075B654 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav3-4A0A075B654 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Nsd1-206ENSMUST00000224918 1001 ntBASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav3-4A0A075B654 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Haglr-201ENSMUST00000100000 2085 ntBASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms