Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav12-3A0A075B648 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Trav12-3A0A075B648 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-3A0A075B648 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-3A0A075B648 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-3A0A075B648 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-3A0A075B648 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.02□□□□□ -0.17
Trav12-3A0A075B648 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12-3A0A075B648 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12-3A0A075B648 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav12-3A0A075B648 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Gm45640-201ENSMUST00000210665 1896 ntBASIC14□□□□□ -0.17
Trav12-3A0A075B648 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12-3A0A075B648 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav12-3A0A075B648 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms