Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 TSPY6P-201ENST00000448518 926 ntBASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 AC231657.2-201ENST00000624556 255 ntBASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 DUX4L16-201ENST00000555130 1264 ntBASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC2Q9Y5Z7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
HCFC2Q9Y5Z7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.27
HCFC2Q9Y5Z7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 AC009237.3-201ENST00000393279 1427 ntBASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 GUSBP6-202ENST00000438529 1198 ntBASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 TSPY20P-201ENST00000450910 630 ntBASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.95■■□□□ 1.26
HCFC2Q9Y5Z7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 SLC7A5P2-201ENST00000553010 536 ntBASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 UBE2DNL-204ENST00000602536 740 ntBASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
HCFC2Q9Y5Z7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 AC007322.1-201ENST00000426983 750 ntBASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 AC005181.1-201ENST00000604782 1256 ntBASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 ABCB10P4-201ENST00000566803 2184 ntBASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
HCFC2Q9Y5Z7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 DUSP8P3-201ENST00000399571 1760 ntBASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 KRT18P6-201ENST00000555540 1265 ntBASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HCFC2Q9Y5Z7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
HCFC2Q9Y5Z7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 AL139125.2-201ENST00000623134 1869 ntBASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 AL138781.1-201ENST00000566567 1274 ntBASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.9■■□□□ 1.26
HCFC2Q9Y5Z7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms