Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 AC137767.1-201ENST00000602918 1920 ntBASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRDM9Q9NQV7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 AC010141.3-201ENST00000456659 717 ntBASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PRDM9Q9NQV7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 IRS3P-201ENST00000223076 1006 ntBASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM9Q9NQV7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 AC079089.2-201ENST00000531211 1277 ntBASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM9Q9NQV7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.52■□□□□ 0.87
PRDM9Q9NQV7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRDM9Q9NQV7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PRDM9Q9NQV7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 OXCT2P1-201ENST00000447263 1535 ntBASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 MIR572-201ENST00000384983 95 ntBASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.5■□□□□ 0.87
PRDM9Q9NQV7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 AC139530.1-201ENST00000575312 1977 ntBASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRDM9Q9NQV7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms