Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 IGHV3-19-201ENST00000521488 291 ntBASIC18.65■□□□□ 0.58
MSL2Q9HCI7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 AC068587.7-201ENST00000641602 218 ntBASIC18.65■□□□□ 0.58
MSL2Q9HCI7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 AC087742.1-201ENST00000575880 1738 ntBASIC18.64■□□□□ 0.57
MSL2Q9HCI7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 AC087239.1-201ENST00000622671 572 ntBASIC18.64■□□□□ 0.57
MSL2Q9HCI7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSL2Q9HCI7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
MSL2Q9HCI7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 ZNRF2P3-201ENST00000424200 374 ntBASIC18.62■□□□□ 0.57
MSL2Q9HCI7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MSL2Q9HCI7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 AC010141.3-201ENST00000456659 717 ntBASIC18.61■□□□□ 0.57
MSL2Q9HCI7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MSL2Q9HCI7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 CLDN5-201ENST00000403084 2357 ntBASIC18.6■□□□□ 0.57
MSL2Q9HCI7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MSL2Q9HCI7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MSL2Q9HCI7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MSL2Q9HCI7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
MSL2Q9HCI7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSL2Q9HCI7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms