Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 ANOS2P-203ENST00000472227 1816 ntBASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATXN3LQ9H3M9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 SMUG1P1-201ENST00000590640 811 ntBASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATXN3LQ9H3M9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
ATXN3LQ9H3M9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 OXCT2P1-201ENST00000447263 1535 ntBASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATXN3LQ9H3M9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 C9orf163-202ENST00000624034 2573 ntBASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATXN3LQ9H3M9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATXN3LQ9H3M9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
ATXN3LQ9H3M9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 DUSP8P5-201ENST00000422884 1815 ntBASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 KRT18P61-201ENST00000585825 1298 ntBASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
ATXN3LQ9H3M9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATXN3LQ9H3M9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
ATXN3LQ9H3M9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATXN3LQ9H3M9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms