Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ALX4Q9H161 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALX4Q9H161 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.33■□□□□ 0.53
ALX4Q9H161 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALX4Q9H161 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALX4Q9H161 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALX4Q9H161 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ALX4Q9H161 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.33■□□□□ 0.52
ALX4Q9H161 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALX4Q9H161 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
ALX4Q9H161 AL157384.1-201ENST00000445995 2473 ntBASIC18.32■□□□□ 0.52
ALX4Q9H161 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.32■□□□□ 0.52
ALX4Q9H161 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ALX4Q9H161 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 AC103724.3-201ENST00000564481 992 ntBASIC18.32■□□□□ 0.52
ALX4Q9H161 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.32■□□□□ 0.52
ALX4Q9H161 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.32■□□□□ 0.52
ALX4Q9H161 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX4Q9H161 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ALX4Q9H161 AL451085.2-201ENST00000605085 799 ntBASIC18.31■□□□□ 0.52
ALX4Q9H161 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
ALX4Q9H161 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.31■□□□□ 0.52
ALX4Q9H161 Z98882.1-201ENST00000622160 2253 ntBASIC18.31■□□□□ 0.52
ALX4Q9H161 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ALX4Q9H161 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.31■□□□□ 0.52
ALX4Q9H161 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX4Q9H161 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ALX4Q9H161 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 FEM1AP4-201ENST00000443167 1987 ntBASIC18.3■□□□□ 0.52
ALX4Q9H161 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ALX4Q9H161 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ALX4Q9H161 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ALX4Q9H161 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.3■□□□□ 0.52
ALX4Q9H161 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX4Q9H161 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.29■□□□□ 0.52
ALX4Q9H161 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ALX4Q9H161 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ALX4Q9H161 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ALX4Q9H161 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ALX4Q9H161 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.29■□□□□ 0.52
ALX4Q9H161 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.29■□□□□ 0.52
ALX4Q9H161 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 AC011551.1-201ENST00000614101 683 ntBASIC18.29■□□□□ 0.52
ALX4Q9H161 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX4Q9H161 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.28■□□□□ 0.52
ALX4Q9H161 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.28■□□□□ 0.52
ALX4Q9H161 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.28■□□□□ 0.52
ALX4Q9H161 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ALX4Q9H161 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.28■□□□□ 0.52
ALX4Q9H161 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ALX4Q9H161 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.28■□□□□ 0.52
ALX4Q9H161 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.28■□□□□ 0.52
ALX4Q9H161 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.28■□□□□ 0.52
ALX4Q9H161 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.28■□□□□ 0.52
ALX4Q9H161 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALX4Q9H161 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 AC144652.1-201ENST00000609974 1624 ntBASIC18.27■□□□□ 0.52
ALX4Q9H161 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ALX4Q9H161 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALX4Q9H161 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ALX4Q9H161 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms