Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sgms1Q8VCQ6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Gm6139-201ENSMUST00000079261 882 ntBASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sgms1Q8VCQ6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sgms1Q8VCQ6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sgms1Q8VCQ6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Sgms1Q8VCQ6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Gm8493-201ENSMUST00000196881 489 ntBASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sgms1Q8VCQ6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sgms1Q8VCQ6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sgms1Q8VCQ6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Sgms1Q8VCQ6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sgms1Q8VCQ6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sgms1Q8VCQ6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sgms1Q8VCQ6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sgms1Q8VCQ6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sgms1Q8VCQ6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sgms1Q8VCQ6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sgms1Q8VCQ6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms