Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCHCR1Q8TD31 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCHCR1Q8TD31 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCHCR1Q8TD31 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.58■■□□□ 1.2
CCHCR1Q8TD31 AC009102.2-201ENST00000606772 1639 ntBASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 FBXW4P1-201ENST00000426721 2239 ntBASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.57■■□□□ 1.2
CCHCR1Q8TD31 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 AC008406.3-201ENST00000620001 1374 ntBASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCHCR1Q8TD31 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 AC131281.2-201ENST00000520478 145 ntBASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.55■■□□□ 1.2
CCHCR1Q8TD31 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 AL512631.2-201ENST00000604634 923 ntBASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCHCR1Q8TD31 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCHCR1Q8TD31 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms