Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 AC012414.1-201ENST00000556676 535 ntBASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 MIR6084-201ENST00000622012 110 ntBASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
FNDC9Q8TBE3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 AC097381.1-201ENST00000429019 1296 ntBASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 MIR6821-201ENST00000617625 74 ntBASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
FNDC9Q8TBE3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 AC010141.3-201ENST00000456659 717 ntBASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 AL354811.1-201ENST00000610286 706 ntBASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 AC105233.4-201ENST00000642045 216 ntBASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FNDC9Q8TBE3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 AC087623.3-201ENST00000607047 1098 ntBASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 LINC01960-201ENST00000563759 1884 ntBASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
FNDC9Q8TBE3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 MIR5787-201ENST00000611784 55 ntBASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FNDC9Q8TBE3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FNDC9Q8TBE3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 AC027612.3-201ENST00000413684 1047 ntBASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 YBX1P1-201ENST00000445822 960 ntBASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FNDC9Q8TBE3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms