Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm11Q8BUV6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm11Q8BUV6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm11Q8BUV6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Etf1-202ENSMUST00000180351 108 ntBASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm11Q8BUV6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm11Q8BUV6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Rarb-207ENSMUST00000225921 2756 ntBASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm11Q8BUV6 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.33■□□□□ 0.21
Lsm11Q8BUV6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm11Q8BUV6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms