Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav2Q5R1I9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav2Q5R1I9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.33■□□□□ 0.05
Trav2Q5R1I9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav2Q5R1I9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav2Q5R1I9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav2Q5R1I9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav2Q5R1I9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav2Q5R1I9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Gm37179-201ENSMUST00000194862 823 ntBASIC15.29■□□□□ 0.04
Trav2Q5R1I9 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms