Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.21■□□□□ 0.67
FREM1Q5H8C1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FREM1Q5H8C1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 AL162430.1-201ENST00000480705 870 ntBASIC19.2■□□□□ 0.66
FREM1Q5H8C1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 MIR6084-201ENST00000622012 110 ntBASIC19.2■□□□□ 0.66
FREM1Q5H8C1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 AC133561.1-201ENST00000568600 2415 ntBASIC19.2■□□□□ 0.66
FREM1Q5H8C1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FREM1Q5H8C1 LINC00526-201ENST00000581067 1875 ntBASIC19.19■□□□□ 0.66
FREM1Q5H8C1 MIR5787-201ENST00000611784 55 ntBASIC19.19■□□□□ 0.66
FREM1Q5H8C1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM1Q5H8C1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM1Q5H8C1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FREM1Q5H8C1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.19■□□□□ 0.66
FREM1Q5H8C1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FREM1Q5H8C1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 CCDC92B-201ENST00000575506 885 ntBASIC19.17■□□□□ 0.66
FREM1Q5H8C1 TERF1P2-201ENST00000583350 1212 ntBASIC19.17■□□□□ 0.66
FREM1Q5H8C1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FREM1Q5H8C1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 BX005040.4-201ENST00000637145 1518 ntBASIC19.16■□□□□ 0.66
FREM1Q5H8C1 SMUG1P1-201ENST00000590640 811 ntBASIC19.16■□□□□ 0.66
FREM1Q5H8C1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FREM1Q5H8C1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.15■□□□□ 0.66
FREM1Q5H8C1 YBX1P1-201ENST00000445822 960 ntBASIC19.15■□□□□ 0.66
FREM1Q5H8C1 AC010141.3-201ENST00000456659 717 ntBASIC19.15■□□□□ 0.66
FREM1Q5H8C1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
FREM1Q5H8C1 AC068473.5-201ENST00000616428 2072 ntBASIC19.14■□□□□ 0.66
FREM1Q5H8C1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
FREM1Q5H8C1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FREM1Q5H8C1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FREM1Q5H8C1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
FREM1Q5H8C1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FREM1Q5H8C1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FREM1Q5H8C1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FREM1Q5H8C1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FREM1Q5H8C1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms