Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCR4P61073 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCR4P61073 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCR4P61073 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.8■□□□□ 0.76
CXCR4P61073 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CXCR4P61073 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.8■□□□□ 0.76
CXCR4P61073 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.8■□□□□ 0.76
CXCR4P61073 AC004987.1-201ENST00000428627 508 ntBASIC19.8■□□□□ 0.76
CXCR4P61073 ATP5G2P3-201ENST00000429083 425 ntBASIC19.8■□□□□ 0.76
CXCR4P61073 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.8■□□□□ 0.76
CXCR4P61073 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.8■□□□□ 0.76
CXCR4P61073 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CXCR4P61073 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CXCR4P61073 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
CXCR4P61073 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.8■□□□□ 0.76
CXCR4P61073 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CXCR4P61073 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CXCR4P61073 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
CXCR4P61073 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CXCR4P61073 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CXCR4P61073 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.79■□□□□ 0.76
CXCR4P61073 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CXCR4P61073 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CXCR4P61073 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.79■□□□□ 0.76
CXCR4P61073 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.78■□□□□ 0.76
CXCR4P61073 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CXCR4P61073 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 AC010980.1-201ENST00000587192 1142 ntBASIC19.78■□□□□ 0.76
CXCR4P61073 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CXCR4P61073 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CXCR4P61073 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CXCR4P61073 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCR4P61073 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CXCR4P61073 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.77■□□□□ 0.76
CXCR4P61073 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCR4P61073 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CXCR4P61073 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.77■□□□□ 0.76
CXCR4P61073 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CXCR4P61073 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.76■□□□□ 0.75
CXCR4P61073 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CXCR4P61073 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.76■□□□□ 0.75
CXCR4P61073 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CXCR4P61073 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CXCR4P61073 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCR4P61073 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCR4P61073 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.75■□□□□ 0.75
CXCR4P61073 CA15P2-201ENST00000611168 834 ntBASIC19.75■□□□□ 0.75
CXCR4P61073 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCR4P61073 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 LINC01529-204ENST00000636474 1715 ntBASIC19.74■□□□□ 0.75
CXCR4P61073 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CXCR4P61073 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.74■□□□□ 0.75
CXCR4P61073 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.74■□□□□ 0.75
CXCR4P61073 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CXCR4P61073 AF106564.1-201ENST00000607058 2553 ntBASIC19.74■□□□□ 0.75
CXCR4P61073 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCR4P61073 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.73■□□□□ 0.75
CXCR4P61073 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCR4P61073 TSPY13P-201ENST00000338964 914 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms